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Jesus M. Cortes

Neuroscience, Brain connectivity and Machine Learning
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Jesus M. Cortes

Neuroscience, Brain connectivity and Machine Learning
  • Search
  • Home
  • Biosketch
  • Latest News
  • Talks
  • Publications
    • JCR Articles
    • non JCRs
    • Abstracts
  • Teaching

2018, Brain networks as a predictor of aging along lifespan. Institute Carlos I for Theoretical and Computational Physics. Granada, Spain

Talks

Brain networks as a predictor of aging along lifespan

Published November 1, 2018

Iñigo Gabilondo, Verónica Llorens, Trinidad Rodriguez, Manuel Fernández, Tomas Pérez Concha, Marian Acera, Beatriz Tijero, Ane Murueta-Goyena, Rocío del Pino, Jesús Cortés, Juan Carlos Gómez-Esteban. Myocardial MIBG scintigraphy in genetic Parkinson’s disease as a model for Lewy body disorders. European Journal of Nuclear Medicine and Molecular Imaging, 46:376-384, 2019 [pdf] Purpose. To identify myocardial sympathetic denervation patterns suggestive of Lewy body (LB) pathology in patients with genetic and idiopathic parkinsonisms […]

JCR Articles Publications

Myocardial MIBG scintigraphy in genetic Parkinson’s disease as a model for Lewy body …

Published October 21, 2018

2018, Brain networks as a predictor of aging along lifespan. COSTNET18 conference. Warsaw, Poland. September 26-28, 2018

Talks

Brain networks as a predictor of aging along lifespan

Published September 28, 2018

Borja Camino-Pontes, Ibai Diez, Antonio Jimenez-Marin, Javier Rasero, Asier Erramuzpe, Paolo Bonifazi, Sebastiano Stramaglia, Stephan Swinnen and Jesus M. Cortes. Interaction Information Along Lifespan of the Resting Brain Dynamics Reveals a Major Redundant Role of the Default Mode Network. Entropy 20: 742, 2018 [pdf] Abstract Interaction Information (II) generalizes the univariate Shannon entropy to triplets of variables, allowing the detection of redundant (R) or synergetic (S) interactions in dynamical networks. […]

JCR Articles Publications

Interaction Information Along Lifespan of the Resting Brain Dynamics Reveals a Major Redundant …

Published September 28, 2018

Olaia Aurtenetxe, Laura Zaldumbide, Asier erramuzpe, Ricardo Lpez, Jos I Lopez, Jess M Cortes, Rafael Pulido* and Caroline E Nunes-Xavier*. (*Equal last-author contribution). DUSP5 expression associates with poor prognosis in human neuroblastoma. Experimental and Molecular Pathology, 105:272-278, 2018 [pdf] Abstract Regulation of growth and differentiation of neuroblastoma (NB) cells is the rational of some maintenance therapies for high-risk NB. MAP kinase phosphatases (MKPs) are potential physiologic regulators of neuronal differentiation […]

JCR Articles Publications

DUSP5 expression associates with poor prognosis in human neuroblastoma

Published September 3, 2018

Desconexión y reconfiguración de redes del cerebro tras traumatismo craneoencefálico. 12° Congreso de Investigación de Neurociencias Aplicadas de la Universidad Nacional Autónoma de Honduras (UNAH).

Talks

Desconexión y reconfiguración de redes del cerebro tras traumatismo cráneoencefálico

Published August 13, 2018

Paolo Bonifazi, Asier Erramuzpe, Ibai Diez, Iñigo Gabilondo, Matthieu P. Boisgontier, Lisa Pauwels, Sebastiano Stramaglia, Stephan P. Swinnen and Jesus M. Cortes. Structure–function multi-scale connectomics reveals a major role of the fronto-striato-thalamic circuit in brain aging. Human Brain Mapping, 39: 4663–4677, 2018 [pdf] Abstract Physiological aging affects brain structure and function impacting morphology, connectivity, and performance. However, whether some brain connectivity metrics might reflect the age of an individual is […]

JCR Articles Publications

Structure–function multi-scale connectomics reveals a major role of the fronto-striato-thalamic circuit in brain …

Published July 16, 2018

Together with other NeuroLagun colleagues, we have organised the first session of a divulgation seminar composed by several short-talks about ageing. Four different talks, Neurogenesis (Juan Manuel Encinas), Imaging (Jesus M Cortes), Cognition (Laiene Olabarrieta) and Physical Activity as protected therapy (Gontzal Grandes). The seminar is Thursday June 14 2018, at 7.00pm in Nestor Basterretxea Aretoa.

Latest News

I Jornadas sobre envejecimiento en Bermeo

Published June 7, 2018

In only 5 years after lab creation, we have got the accreditation of Consolidated of Excellence, according to indications of the National Institute of Health. This has been possible to all wonderful and talented researchers who have worked in the Computational Neuroimaging Laboratory at Biocruces. We are the only group formed by quantitative scientists (physicists and engineers) who has got this prestigious recognition, normally given to Clinical groups.

Latest News

CRUCES ESIko ESKERTZE 2018

Published June 6, 2018

On May 7th, 2018 Asier Erramuzpe defended his Thesis titled “Development of new methods for brain connectivity biomarkers in epilepsy and other pathological conditions”. He got ”Cum Laude por Unaminidad”. Zorionak!!

Latest News

PhD Thesis defense by Asier Erramuzpe

Published June 6, 2018

2018, Brain connectivity for quantification of emergence, dysfunction and reorganization of the pathological brain. Seminars organized by the Neurodegenerative Diseases Group at Biocruces. Barakaldo, Spain

Talks

Brain connectivity for quantification of emergence, dysfunction and reorganization of the pathological brain.

Published June 6, 2018

2018, Neuroimaging in Brain Injury. II Congreso Iberoamericano. Almeria, Spain

Talks

Neuroimaging in Brain Injury

Published June 6, 2018

2018, Data Science for Modern Pathology. SEAP-IAP Destapa. Madrid, Spain

Talks

Data Science for Modern Pathology

Published June 6, 2018

2018, La neuroimagen computacional. Una recreación funcional de la neuroanatomia. Ciclo de conferencias FME 50 Urte. Leioa, Spain

Talks

La neuroimagen computacional. Una recreacion funcional de la neuroanatomia

Published February 26, 2018

In collaboration with Luca Gerardo – Giorda (BCAM, Bilbao) and Sebastiano Stramaglia (Univ of Bari), we are organizing the 2018 Quantitative Biomedicine Workshop. Further information (program and registration info) can be found at http://www.bcamath.org/en/workshops/qbio2018 The poster conference [pdf] The book of abstracts [pdf]

Latest News

4th Quantitative Biomedicine Workshop (2018)

Published February 26, 2018

T. Lissek., et. al. , M.T. Hasan. Building Bridges through Science. Neuron 96:730-735, 2017 [pdf] Science is ideally suited to connect people from different cultures and thereby foster mutual understanding. To promote international life science collaboration, we have launched ‘‘The Science Bridge’’ initiative. Our current project focuses on partnership between Western and Middle Eastern neuroscience communities.

JCR Articles Publications

Building Bridges through Science

Published February 2, 2018

I am Ikerbasque Research Professor (hosted by the new created BioCruces) Further information: 1. Visit its website 2. Watch this introductory video 3. Read this dossier 4. Watch the video on the 2014 scientific output 5. Read the research strategy for the years 2018-2021 Annual Reports: 1. 2007-2011 scientific output 2. 2012 scientific output 3. 2013 scientific output 4. 2014 scientific output 5. 2015 scientific output 6. 2017 scientific output […]

Latest News

What is Ikerbasque?

Published January 26, 2018

2017, From multimodal images to connectivity of brain networks in both healthy and pathological conditions. COSTNET17 Conference. Mallorca, Spain

Talks

From multimodal images to connectivity of brain networks in both healthy and pathological …

Published November 7, 2017

2017, Brain disconnectivity after traumatic brain injury. 3rd ANNUAL NEUROSCIENCE CONFERENCE. Aga Khan University. Karachi, Pakistan

Talks

Brain disconnectivity after traumatic brain injury

Published November 7, 2017

A. Erramuzpe, JM Cortes and JI Lopez. Multisite tumor sampling enhances the detection of intratumor heterogeneity at all different temporal stages of tumor evolution. Virchows Arch 472:187-194, 2018 [pdf] Abstract Intratumor heterogeneity (ITH) is an inherent process of tumor development that has received much attention in previous years, as it has become a major obstacle for the success of targeted therapies. ITH is also temporally unpredictable across tumor evolution, which […]

JCR Articles Publications

Multisite tumor sampling enhances the detection of intratumor heterogeneity at all different temporal …

Published November 7, 2017

Javier Rasero*, Carmen Alonso Montes*, Ibai Diez*, Laiene Olabarrieta-Landa, Lakhdar Remaki, Iñaki Escudero, Beatriz Mateos Goñi, Paolo Bonifazi, Manuel Fernandez Martinez, Juan Carlos Arango-Lasprilla, Sebastiano Stramaglia** and Jesus Cortes** (*Equal first-author contribution) (**Equal last-author contribution). Group-Level Progressive Alterations in Brain Connectivity Patterns Revealed by Diffusion-Tensor Brain Networks across Severity Stages in Alzheimer’s Disease. Frontiers in Aging Neuroscience 9:215, 2017 [pdf] Alzheimer’s disease (AD) is a chronically progressive neurodegenerative disease highly […]

JCR Articles Publications

Group-Level Progressive Alterations in Brain Connectivity Patterns Revealed by Diffusion-Tensor Brain Networks across …

Published July 12, 2017

J Rasero, M Pellicoro, L Angellini, JM Cortes, D Marinazzo, S Stramaglia. Consensus clustering approach to group brain connectivity matrices. Network Neuroscience 1: 242-253, 2017 [pdf] A novel approach rooted on the notion of consensus clustering, a strategy developed for community detection in complex networks, is proposed to cope with the heterogeneity that characterizes connectivity matrices in health and disease. The method can be summarized as follows: (i) define, for […]

JCR Articles Publications

Consensus clustering approach to group brain connectivity matrices

Published July 12, 2017

JM Cortes, Giovanni de Petris, JI Lopez. Detection of intra-tumor heterogeneity in modern pathology: A multi-site tumor sampling (MSTS) perspective. Frontiers in Medicine 4:25 , 2017 [pdf] Current sampling protocols of neoplasms along the digestive tract and in the urinary bladder have to be updated, as they do not respond to the necessities of modern personalized medicine. We show here that an adapted version of multisite tumor sampling (MSTS) is […]

JCR Articles Publications

Detection of intra-tumor heterogeneity in modern pathology: A multi-site tumor sampling (MSTS) perspective

Published July 12, 2017

JM Kroos, I Marinelli, I Diez, JM Cortes, S Stramaglia, and L Gerardo-Giorda. Patient-specific computational modeling of Cortical Spreading Depression via Diffusion Tensor Imaging. International Journal for Numerical Methods in Biomedical Engineering, 2017 [pdf] Cortical spreading depression, a depolarization wave originating in the visual cortex and traveling towards the frontal lobe, is commonly accepted as a correlate of migraine visual aura. As of today, little is known about the mechanisms […]

JCR Articles Publications

Patient-specific computational modeling of Cortical Spreading Depression via Diffusion Tensor Imaging

Published July 12, 2017

2017. From multimodal images to connectivity of brain networks in both healthy and pathological conditions. Friedrich-Alexander-Universitt, Germany

Talks

From multimodal images to connectivity of brain networks in both healthy and pathological …

Published July 12, 2017

2017. Brain disconnectivity and reorganization after TBI. Basque Neurology Society. Getxo, Spain

Talks

Brain disconnectivity and reorganization after TBI

Published July 12, 2017

2017. Evidence and future in neuroimaging and brain connectivitty in Sanfilippo Syndrome. Mead Johnson Bilbao, Spain

Talks

Evidence and future in neuroimaging and brain connectivitty in Sanfilippo Syndrome

Published July 12, 2017

S. Stramaglia, M. Pellicoro, L. Angelini, E. Amico, H. Aerts, J.M. Cortes, S. Laureys, and D. Marinazzo. Ising Model with conserved magnetization on the Human Connectome: implications on the relation structure-function in wakefulness and anesthesia. Chaos 27: 047407, 2017 [pdf] Dynamical models implemented on the large scale architecture of the human brain may shed light on how function arises from the underlying structure.This is the case notably for simple abstract […]

JCR Articles Publications

Ising Model with conserved magnetization on the Human Connectome: implications on the relation …

Published February 1, 2017

Jose Ignacio Lopez and Jesus M Cortes. Multi-Site Tumor Sampling (MSTS): A new tumor selection method to enhance intratumor heterogeneity detection. Human Pathology 64:1-6, 2017 [pdf] Intratumor heterogeneity (ITH) is increasingly being recognized as a highly complex process with high clinical impact that deserves special attention from practicing pathologists. The goodness of the ITH detection depends on the correctness of the pathologist’s sampling. The goal of this review is twofold. […]

JCR Articles Publications

Multi-Site Tumor Sampling (MSTS): A new tumor selection method to enhance intratumor …

Published February 1, 2017

Ildefonso de la Fuente, Iker Malaina, Alberto Perez-Samartin, Maria D. Boyano, Gorka Perez- Yarza, Carlos Bringas, Alvaro Villarroel, Maria Fedetz, Jesus M Cortes and Luis Martinez. Dynamic properties of calcium-activated chloride currents in Xenopus laevis oocytes. Scientific Reports 7:41791, 2017 [pdf] Chloride is the most abundant permeable anion in the cell, and numerous studies in the last two decades highlight the great importance and broad physiological role of chloride currents […]

JCR Articles Publications

Dynamic properties of calcium-activated chloride currents in Xenopus laevis oocytes

Published February 1, 2017

[spanish]

Jesus M. Cortes, Physicist, Data Scientist:

  • More than 25 years experience - In research, working in data science, including modeling, analyses, and image processing, see my ORCID profile at https://orcid.org/0000-0002-9059-8194
  • High interdisciplinary experience - Combining physics, neuroscience, neuroimaging, data science, engineering, and medicine.
  • Getting funding - In competitive calls and working with the industry, achieving funding for more than 9,30 Millions Euros.
  • Science communication - Giving more than 127 talks at the international level, and publishing 135 articles indexed in Journal Citation Reports, 105 of them in the first quartile.
  • Training of qualified professionals - Supervising more than 40 students, including Bachelor, Master, and Thesis.
  • Research projects evaluation - Regularly for different funding agencies such as Spanish National Science and Health Ministry, and also at international programs, such as the Marie Sklodowska-Curie Actions, the Israel Science Foundation, the Research Foundation Flanders (FWO), the EPSRC in the UK, and the BBSRC in the UK.

Contact - If you are interested in knowing details or possibilities of collaboration:
Jesus M. Cortes, Ph.D.:
jesus.m.cortes@gmail.com
Computational Neuroimaging Lab
BioBizkaia Health Research Institute
Hospital Universitario Cruces
Plaza de Cruces, s/n E-48903. Barakaldo, Spain
Tel +34 94 600 6000 (ext. 5199)


 

Jesus M. Cortes, Físico, Científico de Datos:

  • Más de 25 años de experiencia - En investigación, trabajando con datos, en modelado, análisis e imágenes. Consulte mi perfil profesional ORCID en https://orcid.org/0000-0002-9059-8194
  • Altamente interdisciplinar - Combinando física, neurociencias, neuroimagen, ciencia de datos, ingeniería y medicina.
  • Consiguiendo financiación - En convocatorias competitivas y trabajando con la industria, habiendo conseguido más de 9,30 Millones de Euros.
  • Difusión internacional - Impartiendo más de 127 charlas a nivel internacional y publicando más 135 artículos indexados en el Journal Citation Reports, 105 de ellos en primer cuartil.
  • Formación de personal cualificado - Supervisando a más de 40 estudiantes, incluyendo Licenciatura, Maestría y Tesis.
  • Evaluación de proyectos - Lo hago de forma habitual en el Plan Nacional de Ciencia y Salud Español, y en programas internacionales, incluidas las acciones Marie Sklodowska-Curie, la Israel Science Foundation, la Research Foundation Flanders (FWO), EPSRC en Reino Unido y BBSRC en Reino Unido.
  • Contacta - Si estás interesado en conocer detalles o posibilidades de colaboración:

Jesus M. Cortes, Ph.D.:
jesus.m.cortes@gmail.com
Computational Neuroimaging Lab
BioBizkaia Health Research Institute
Hospital Universitario Cruces
Plaza de Cruces, s/n E-48903. Barakaldo, Spain
Tel +34 94 600 6000 (ext. 5199)

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