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Jesus M. Cortes

Neuroscience, Brain connectivity and Machine Learning
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Jesus M. Cortes

Neuroscience, Brain connectivity and Machine Learning
  • Search
  • Home
  • Biosketch
  • Latest News
  • Talks
  • Publications
    • JCR Articles
    • non JCRs
    • Abstracts
  • Teaching

2019, Brain networks as a predictor of aging along lifespan. 15th Granada Seminar on Stochastic and Collective Effects in Neural Systems: Biological aspects, Modeling, Dynamics, Networks, Function and Applications. September 17-20, 2019. Granada, Spain

Talks

Brain networks as a predictor of aging along lifespan

Published September 22, 2019

2019, Taller de Neuroimagen y Daño Cerebral. Precongreso del III Congreso Iberoamericano de Neuropsicologia y II Congreso de la Sociedad Colombiana de Neuropsicologia: Avances en la Disciplina. Universidad Pontificia Universidad Javeriana de Cali. 12-14 Septiembre 2019. Cali, Colombia.

Talks

Taller de Neuroimagen y Daño Cerebral

Published September 22, 2019

2019, Mapeo de sintomas a redes del cerebro en daño cerebral. III Congreso Iberoamericano de Neuropsicologia y II Congreso de la Sociedad Colombiana de Neuropsicologia: Avances en la Disciplina. Universidad Pontificia Universidad Javeriana de Cali. 12-14 Septiembre 2019. Cali, Colombia.

Talks

Mapeo de sintomas a redes del cerebro en daño cerebral

Published September 22, 2019

2019, Brain networks as a predictor of aging along lifespan. Summer School in Computational and Theoretical Models in Neuroscience. Venice, Italy. September 9-14, 2019

Talks

Brain networks as a predictor of aging along lifespan

Published September 22, 2019

2019, Brain networks as a predictor of aging along lifespan. KU Leuven. September 4, 2019

Talks

Brain networks as a predictor of aging along lifespan

Published September 22, 2019

2019, Brain networks as a predictor of aging along lifespan. am4ndalille – Advanced methods for neuroimaging data analysis workshop. University of Lille, France. September 2-3, 2019

Talks

Brain networks as a predictor of aging along lifespan

Published September 22, 2019

2019, Brain networks as a predictor of aging along lifespan. Beacon Precision Imaging. University of Nottingham, UK. June 29, 2019

Talks

Brain networks as a predictor of aging along lifespan

Published August 31, 2019

2019, Machine Learning Applications to Melanoma Prognosis. Abordaje Interdisciplinar en el Estudio del Melanoma. Bizkaia Aretioa, May 24-25. Bilbao, 2019

Talks

Machine Learning Applications to Melanoma Prognosis

Published August 31, 2019

Since creation date of Sept 2012, we got last year the recognition of CRUCES ESIko ESKERTZE 2018 for being a Group Consolidated of Excellence, according to indications of the National Institute of Health. This year 2019, we got a second recognition CRUCES ESIko ESKERTZE 2019, for being a Group with responsible researcher younger than 45 years old. Among the 58 different groups within Biocruces-Bizkaia Health Research Institute, our group of […]

Latest News

CRUCES ESIko ESKERTZE 2019

Published July 27, 2019

Cristina Sanchez-Puelles, Maria Calleja-Felipe, Alberto Ouro, Ghassen Bougamra, Ana Arroyo, Ibai Diez, Asier Erramuzpe, Jesus Cortes, Jose Martinez-Hernandez, Rafael Lujn, Marta Navarrete, Cesar Venero, Andrew Chan, Miguel Morales, Jose A. Esteban and Shira Knafo. PTEN activity defines an axis for plasticity at cortico-amygdala synapses and determines social behavior. Cerebral Cortex 30:505-524, 2019 [pdf] Abstract Phosphatase and tensin homolog on chromosome 10 (PTEN) is a tumor suppressor and autism-associated gene that […]

JCR Articles Publications

PTEN activity defines an axis for plasticity at cortico-amygdala synapses and determines social …

Published July 27, 2019

Ane Murueta-Goyena , Roco del Pino, Paula Reyero , Marta Galds, Begoa Arana, Olaia Lucas Jimenez, Marian Acera, Beatriz Tijero, Naroa Ibarretxe-Bilbao, Natalia Ojeda, Javier Pea, Jesus Cortes, Juan Carlos Gomez-Esteban, Iñigo Gabilondo. Parafoveal thinning of inner retina is associated with visual dysfunction in Lewy body diseases.  Movement disorders 34:1315-1324, 2019 [pdf] Abstract Background: Retinal optical coherence tomography findings in Lewy body diseases and their implications for visual outcomes remain controversial. […]

JCR Articles Publications

Parafoveal thinning of inner retina is associated with visual dysfunction in Lewy body …

Published July 27, 2019

2019, Brain biomarkers in neurological disorders. Los Libertadores University. Bogota, Colombia. July, 2019

Talks

Brain biomarkers in neurological disorders

Published July 27, 2019

Together with other NeuroLagun colleagues, we have organised the first session of a divulgation seminar composed by several short-talks about ageing. Four different talks, Neurogenesis (Juan Manuel Encinas), Imaging (Jesus M Cortes), Cognition (Laiene Olabarrieta) and Physical Activity as protected therapy (Gontzal Grandes). The seminar was March 26 2019, at 6.00pm Gernika-Lumoko Kultur Etxean

Latest News

I Jornadas sobre envejecimiento en Gernika

Published May 19, 2019

Together with other NeuroLagun colleagues, we have organised the first session of a divulgation seminar composed by several short-talks about ageing. Four different talks, Neurogenesis (Juan Manuel Encinas), Imaging (Jesus M Cortes), Cognition (Laiene Olabarrieta) and Physical Activity as protected therapy (Gontzal Grandes). The seminar was Thursday May 16 2019, at 6.00pm in Goñi Portal.

Latest News

I Jornadas sobre envejecimiento en Plentzia

Published May 19, 2019

2019, Brain Networks as Biomarkers in neurodegenerative diseases: Fundaments and Examples. II Jornadas de Neurologa. La Guardia, Spain. Sponsored by Alter Medica

Talks

Brain Networks as Biomarkers in Neurodegenerative Diseases

Published May 19, 2019

I was the Local Chair of the Annual Meeting of the COSTNET Action. More information at https://costnetbilbao.wordpress.com/ 110 researchers on network science attended from 24 different countries. A success event that is summarized in the following video The book of abstracts can be downloaded here This has been possible thanks to a wonderful of team of local colleagues and friends, mainly, Diego Rivera (Public University of Navarre), Borja Camino Pontes […]

Latest News

COSTNET BILBAO 2019

Published May 19, 2019

In collaboration with Luca Gerardo – Giorda (BCAM, Bilbao) and Sebastiano Stramaglia (Univ of Bari), we are organized the 2019 Quantitative Biomedicine Workshop. The poster conference [pdf] The book of abstracts [pdf]

Latest News

5th Quantitative Biomedicine Workshop (2019)

Published May 19, 2019

2019, Introduction to functional connectivity to study the pathological brain. MSc Neuroscience. University of the Basque Country, Spain

Talks

Introduction to functional connectivity to study the pathological brain

Published March 5, 2019

2019, Introdution to Computational Neuroimaging. MSc in Neuroscience. University of the Basque Country, Spain

Talks

Introdution to Computational Neuroimaging

Published March 5, 2019

Jesus M. Cortes, Paolo Bonifazi, Iñaki Escudero, Beatriz Mateos, Miguel Angel Muñoz, Sebastiano Stramaglia, Jesus M. Cortes, Borja Camino-Pontes, Antonio Jimenez-Marin, Javier Rasero, Asier Erramuzpe, Stephan Swinnen, Iñigo Gabilondo, Matthieu P. Boisgontier, Lisa Pauwels, Laiene Olabarrieta-Landa, Manuel Fernandez Martinez, Juan Carlos Arango Lasprilla, David Drijkoningen, Daniele Marinazzo, Jolien Gooijers, Ibai Diez. Brain Hierarchical Atlas: Multi-Scale versus Optimal Strategies in the Pathological Brain. OHBM 2019 – Organization for Human Brain Mapping […]

Abstracts Publications

Brain Hierarchical Atlas: Multi-Scale versus Optimal Strategies in the Pathological Brain

Published March 5, 2019

Borja Camino-Pontes, Ibai Diez, Antonio Jimenez-Marin, Javier Rasero, Asier Erramuzpe, Paolo Bonifazi, Sebastiano Stramaglia, Stephan Swinnen, Jesus M. Cortes. Interaction Information Along Lifespan Reveals a Redundant Role of the Default Mode Network. OHBM 2019 – Organization for Human Brain Mapping [pdf] Introduction: In this work recenty published (Camino-Pontes et al 2018), we show that the use of interaction information (II) can detect redundant or synergetic interactions in dynamical networks. De […]

Abstracts Publications

Interaction Information Along Lifespan Reveals a Redundant Role of the Default Mode Network

Published March 5, 2019

Antonio Jimenez-Marin, Diego Rivera, Victoria Boado, Ibai Diez, Fermin Labayen, Irati Garrido, Daniela Ramos-Usuga, Javier Rasero, Alberto Cabrera-Zubizarreta, Iñigo Gabilondo, Sebastiano Stramaglia, Juan Carlos Arango Lasprilla, Jesus M. Cortes. Resting State Analysis in Multiorgan Failure Reveals Default Mode Network hyperconnectivity. OHBM 2019 – Organization for Human Brain Mapping [pdf] Introduction: Multiorgan Failure (MF) is a life-threating and potentially reversible condition that can affect patients admitted to Intensive Care Units (ICUs). […]

Abstracts Publications

Resting State Analysis in Multiorgan Failure Reveals Default Mode Network hyperconnectivity

Published March 5, 2019

Paolo Bonifazi, Asier Erramuzpe, Ibai Diez, Iñigo Gabilondo, Matthieu P. Boisgontier, Lisa Pauwels, Sebastiano Stramaglia, Stephan Swinnen, Borja Camino-Pontes, Antonio Jimenez-Marin, Jesus M. Cortes. Structure-function multi-scale connectomics is an accurate predictor of brain aging. OHBM 2019 – Organization for Human Brain Mapping [pdf] Introduction: Aging is a dynamical process that encompasses a systemic time-dependent decline on multiple scales from biological to psychological and social levels. Interestingly, individuals with the same […]

Abstracts Publications

Structure-function multi-scale connectomics is an accurate predictor of brain aging

Published March 5, 2019

Sebastaino Stramaglia, Javier Rasero, Jesus M. Cortes, Daniele Marinazzo, Ibai Diez. Connectome sorting by Consensus Clustering increases separability in group neuroimaging studies. OHBM 2019 – Organization for Human Brain Mapping [pdf] Introduction: A fundamental challenge in preprocessing pipelines for neuroimaging datasets is to increase the signal-to-noise ratio for subsequent analyses. This can be achieved for example by getting more compact groups before performing any statistical comparison. In this regard, the […]

Abstracts Publications

Connectome sorting by Consensus Clustering increases separability in group neuroimaging studies

Published March 5, 2019

Javier Rasero, Hannelore Aerts, Marlis Ontivero Ortega, Jesus M. Cortes, Sebastiano Stramaglia, Daniele Marinazzo. Functional Network prediction from region connectivity profiles and application to brain tumor data. OHBM 2019 – Organization for Human Brain Mapping [pdf] Introduction: Intrinsic Connectivity Networks (ICNs), patterns of correlated activity emerging from “resting- state” BOLD time series, are increasingly being associated with cognitive, clinical, and behavioral aspects, and compared with the pattern of activity elicited […]

Abstracts Publications

Functional Network prediction from region connectivity profiles and application to brain tumor data

Published March 5, 2019

Jose I. Lopez, Rafael Pulido, Jesus M. Cortes , Javier C. Angulo, and Charles H. Lawrie. Potential impact of PD-L1 (SP-142) immunohistochemical heterogeneity in clear cell renal cell carcinoma immunotherapy.  Pathol Res Pract 214:1110-1114, 2018 [pdf] Abstract Intratumor heterogeneity (ITH) detection remains a challenge in modern oncology because it can have a direct impact on the success of new therapies. Anti-PD-1/PD-L1 immunotherapy is an emerging treatment modality that is showing great promise for […]

JCR Articles Publications

Potential impact of PD- L1 (SP-142) immunohistochemical heterogeneity in clear cell renal cell …

Published December 26, 2018

Together with other NeuroLagun colleagues, we have organised the second session of a divulgation seminar composed by several short-talks about ageing. Four different talks, Most prevalent neurodegenerative diseases in ageing (Iñigo Gabilondo), Treatment and care in the Basque Country (Juan Carlos Gomez), Rehabilitation (Juan Carlos Arango), Attention to the caregiver (Laiene Olabarrieta) The seminar is Tuesday Dec 18 2018, at 7.00pm in Nestor Basterretxea Aretoa

Latest News

II Jornadas sobre envejecimiento en Bermeo

Published December 13, 2018

2018, A brain hierarchical atlas to study the pathological brain. Andalusian Institute for Data Science and Computational Intelligence. Granada, Spain

Talks

A brain hierarchical atlas to study the pathological brain

Published November 24, 2018

Javier Rasero, Ibai Diez, Jesus M Cortes, Daniele Marinazzo and Sebastiano Stramaglia. Connectome sorting by Consensus Clustering increases separability in group neuroimaging studies. Network Neuroscience , 3: 325–343, 2018 [pdf] Abstract A fundamental challenge in preprocessing pipelines for neuroimaging datasets is to increase the signal-to-noise ratio for subsequent analyses. In the same line, we suggest here that the application of the consensus clustering approach to brain connectivity matrices can be […]

JCR Articles Publications

Connectome sorting by Consensus Clustering increases separability in group neuroimaging studies

Published November 21, 2018

Javier Rasero, Hannelore Aerts, Marlis Ontivero Ortega, Jesus M. Cortes, Sebastiano Stramaglia , Daniele Marinazzo. Predicting functional networks from region connectivity profiles in task-based versus resting-state fMRI data PLoS One, 13: e0207385, 2018 [pdf] Abstract Intrinsic Connectivity Networks, patterns of correlated activity emerging from “resting-state” BOLD time series, are increasingly being associated with cognitive, clinical, and behavioral aspects, and compared with patterns of activity elicited by specific tasks. We study […]

JCR Articles Publications

Predicting functional networks from region connectivity profiles in task-based versus resting-state fMRI data

Published November 21, 2018

[spanish]

Jesus M. Cortes, Physicist, Data Scientist:

  • More than 25 years experience - In research, working in data science, including modeling, analyses, and image processing, see my ORCID profile at https://orcid.org/0000-0002-9059-8194
  • High interdisciplinary experience - Combining physics, neuroscience, neuroimaging, data science, engineering, and medicine.
  • Getting funding - In competitive calls and working with the industry, achieving funding for more than 9,30 Millions Euros.
  • Science communication - Giving more than 127 talks at the international level, and publishing 135 articles indexed in Journal Citation Reports, 105 of them in the first quartile.
  • Training of qualified professionals - Supervising more than 40 students, including Bachelor, Master, and Thesis.
  • Research projects evaluation - Regularly for different funding agencies such as Spanish National Science and Health Ministry, and also at international programs, such as the Marie Sklodowska-Curie Actions, the Israel Science Foundation, the Research Foundation Flanders (FWO), the EPSRC in the UK, and the BBSRC in the UK.

Contact - If you are interested in knowing details or possibilities of collaboration:
Jesus M. Cortes, Ph.D.:
jesus.m.cortes@gmail.com
Computational Neuroimaging Lab
BioBizkaia Health Research Institute
Hospital Universitario Cruces
Plaza de Cruces, s/n E-48903. Barakaldo, Spain
Tel +34 94 600 6000 (ext. 5199)


 

Jesus M. Cortes, Físico, Científico de Datos:

  • Más de 25 años de experiencia - En investigación, trabajando con datos, en modelado, análisis e imágenes. Consulte mi perfil profesional ORCID en https://orcid.org/0000-0002-9059-8194
  • Altamente interdisciplinar - Combinando física, neurociencias, neuroimagen, ciencia de datos, ingeniería y medicina.
  • Consiguiendo financiación - En convocatorias competitivas y trabajando con la industria, habiendo conseguido más de 9,30 Millones de Euros.
  • Difusión internacional - Impartiendo más de 127 charlas a nivel internacional y publicando más 135 artículos indexados en el Journal Citation Reports, 105 de ellos en primer cuartil.
  • Formación de personal cualificado - Supervisando a más de 40 estudiantes, incluyendo Licenciatura, Maestría y Tesis.
  • Evaluación de proyectos - Lo hago de forma habitual en el Plan Nacional de Ciencia y Salud Español, y en programas internacionales, incluidas las acciones Marie Sklodowska-Curie, la Israel Science Foundation, la Research Foundation Flanders (FWO), EPSRC en Reino Unido y BBSRC en Reino Unido.
  • Contacta - Si estás interesado en conocer detalles o posibilidades de colaboración:

Jesus M. Cortes, Ph.D.:
jesus.m.cortes@gmail.com
Computational Neuroimaging Lab
BioBizkaia Health Research Institute
Hospital Universitario Cruces
Plaza de Cruces, s/n E-48903. Barakaldo, Spain
Tel +34 94 600 6000 (ext. 5199)

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