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Jesus Cortes

Brain Connectivity & Machine Learning
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Jesus Cortes

Brain Connectivity & Machine Learning
  • Search
  • Home
  • Biosketch
  • Latest News
  • Talks
  • Publications
    • JCR Articles
    • non JCRs
    • Abstracts
  • Docencia

Filippo Mancuso, Sergio Lage, Javier Rasero, José Luis Díaz‐Ramón, Aintzane Apraiz, Gorka Pérez‐Yarza, Pilar Ariadna Ezkurra, Cristina Penas, Ana Sánchez‐Diez, María Dolores García‐Vazquez, Jesús Gardeazabal, Rosa Izu, Karmele Mujika, Jesús Cortés, Aintzane Asumendi, and María Dolores Boyano. Serum markers improve current prediction of metastasis development in early‐stage melanoma patients: a machine learning‐based study. Molecular Oncology 14:1705-1718, 2020 [pdf] Abstract Metastasis development represents an important threat for melanoma patients, even when […]

JCR Articles Publications

Serum markers improve current prediction of metastasis development in early‐stage melanoma patients: a …

Published June 12, 2020

Headed by Prof. Mazahir Hasan in the Achucarro Center for Neuroscience, and together with Prof. Pedro Ramos in CIC-Biomagune, we were the first team in Spain funded by the prestigious NIH-funded Brain Initiative. We aim to develop full-brain imaging genetic-technology at the cellular resolution. You can find more information at: https://www.ikerbasque.net/en/news/novel-genetic-technology-functional-mapping-entire-brain and in Spanish at: https://cadenaser.com/emisora/2020/05/28/radio_bilbao/1590659425_641261.html

Latest News

NIH Brain Initiative funded our project!

Published June 12, 2020

Antonio Jimenez-Marin, Diego Rivera, Victoria Boado, Ibai Diez, Fermin Labayen, Irati Garrido, Daniela Ramos-Usuga, Itziar Benito-Sanchez, Javier Rasero, Alberto Cabrera Zubizarreta, Inigo Gabilondo, Sebastiano Stramaglia, Juan Carlos Arango-Lasprilla, Jesus M. Cortes. Brain Connectivity And Cognitive Functioning In Individuals Six Months After Multiorgan Failure Neuroimage: Clinical 25: 102137, 2020 [pdf] Abstract Multiorgan failure (MOF) is a life-threating condition that affects two or more systems of organs not involved in the disorder […]

JCR Articles Publications

Brain Connectivity And Cognitive Functioning In Individuals Six Months After Multiorgan Failure

Published December 26, 2019

Caroline E. Nunes-Xavier, Olaia Aurtenetxe, Laura Zaldumbide, Ricardo López-Almaraz, Asier Erramuzpe, Jesús M. Cortés, José I. López and Rafael Pulido. Protein tyrosine phosphatase PTPN1 modulates cell growth and associates with poor outcome in human neuroblastoma Diagnostic Pathology 14:134, 2019 [pdf] Abstract Background: Protein tyrosine phosphatases (PTPs) regulate neuronal differentiation and survival, but their expression patterns and functions in human neuroblastoma (NB) are scarcely known. Here, we have investigated the function […]

JCR Articles Publications

Protein tyrosine phosphatase PTPN1 modulates cell growth and associates with poor outcome in …

Published December 26, 2019

Ildefonso M. De la Fuente, Carlos Bringas, Iker Malaina, Benjamin Regner, Alberto Pérez-Samartín, María Dolores Boyano, María Fedetz, José I. López, Gorka Pérez-Yarza, Jesus M. Cortes and Terrence Sejnowski. The nucleus does not significantly affect the migratory trajectories of amoeba in two-dimensional environments Scientific Reports 9:16369, 2019 [pdf] Abstract For a wide range of cells, from bacteria to mammals, locomotion movements are a crucial systemic behavior for cellular life. Despite […]

JCR Articles Publications

The nucleus does not significantly affect the migratory trajectories of amoeba in two-dimensional …

Published December 26, 2019

Garazi Labayru, Ibai Diez, Jorge Sepulcre, Esther Fernández, Miren Zulaica, Jesús M. Cortés, Adolfo López de Munain, Andone Sistiaga. Regional brain atrophy in gray and white matter is associated with cognitiveimpairment in Myotonic Dystrophy type 1 Neuroimage: Clinical 24: 102078, 2019 [pdf] Abstract Background Myotonic Dystrophy type 1 (DM1) is a slowly progressive myopathy characterized by varying multisystemic involvement. Several cerebral features such as brain atrophy, ventricular enlargement, and white […]

JCR Articles Publications

Regional brain atrophy in gray and white matter is associated with cognitiveimpairment in …

Published December 26, 2019

Peter beim Graben, Antonio Jimenez-Marin, Ibai Diez, Jesus M. Cortes, Mathieu Desroches and Serafim Rodrigues. Metastable Resting State Brain Dynamics. Frontiers in Computational Neuroscience 13:62, 2019 [pdf] Abstract Metastability refers to the fact that the state of a dynamical system spends a large amount of time in a restricted region of its available phase space before a transition takes place, bringing the system into another state from where it might […]

JCR Articles Publications

Metastable Resting State Brain Dynamics

Published December 26, 2019

Together with other NeuroLagun colleagues, we have organised the second session of a divulgation seminar composed by several short-talks about ageing. Four different talks, Most prevalent neurodegenerative diseases in ageing (Iñigo Gabilondo), Treatment and care in the Basque Country (Juan Carlos Gomez), Rehabilitation (Juan Carlos Arango), Attention to the caregiver (Laiene Olabarrieta) The seminar is Tuesday Nov 26th 2019, at 6.00pm in Astra-Gernika

Latest News

II Jornadas Envejecimiento en Gernika

Published December 26, 2019

Together with other NeuroLagun colleagues, we have organised the second session of a divulgation seminar composed by several short-talks about ageing. Four different talks, Most prevalent neurodegenerative diseases in ageing (Iñigo Gabilondo), Treatment and care in the Basque Country (Juan Carlos Gomez), Rehabilitation (Juan Carlos Arango), Attention to the caregiver (Laiene Olabarrieta) The seminar is Thursday Oct 17th 2019, at 6.00pm in Goñi Portal

Latest News

II Jornadas Envejecimiento Plentzia

Published December 26, 2019

2019, Multiscale Brain Hierarchial Networks. COSNET19- Bilbao. October 9-11 Bilbao. Spain

Talks

Multiscale Brain Hierarchial Networks

Published November 18, 2019

2019, Brain networks as a predictor of aging along lifespan. 15th Granada Seminar on Stochastic and Collective Effects in Neural Systems: Biological aspects, Modeling, Dynamics, Networks, Function and Applications. September 17-20, 2019. Granada, Spain

Talks

Brain networks as a predictor of aging along lifespan

Published September 22, 2019

2019, Taller de Neuroimagen y Daño Cerebral. Precongreso del III Congreso Iberoamericano de Neuropsicologia y II Congreso de la Sociedad Colombiana de Neuropsicologia: Avances en la Disciplina. Universidad Pontificia Universidad Javeriana de Cali. 12-14 Septiembre 2019. Cali, Colombia.

Talks

Taller de Neuroimagen y Daño Cerebral

Published September 22, 2019

2019, Mapeo de sintomas a redes del cerebro en daño cerebral. III Congreso Iberoamericano de Neuropsicologia y II Congreso de la Sociedad Colombiana de Neuropsicologia: Avances en la Disciplina. Universidad Pontificia Universidad Javeriana de Cali. 12-14 Septiembre 2019. Cali, Colombia.

Talks

Mapeo de sintomas a redes del cerebro en daño cerebral

Published September 22, 2019

2019, Brain networks as a predictor of aging along lifespan. Summer School in Computational and Theoretical Models in Neuroscience. Venice, Italy. September 9-14, 2019

Talks

Brain networks as a predictor of aging along lifespan

Published September 22, 2019

2019, Brain networks as a predictor of aging along lifespan. KU Leuven. September 4, 2019

Talks

Brain networks as a predictor of aging along lifespan

Published September 22, 2019

2019, Brain networks as a predictor of aging along lifespan. am4ndalille – Advanced methods for neuroimaging data analysis workshop. University of Lille, France. September 2-3, 2019

Talks

Brain networks as a predictor of aging along lifespan

Published September 22, 2019

2019, Brain networks as a predictor of aging along lifespan. Beacon Precision Imaging. University of Nottingham, UK. June 29, 2019

Talks

Brain networks as a predictor of aging along lifespan

Published August 31, 2019

2019, Machine Learning Applications to Melanoma Prognosis. Abordaje Interdisciplinar en el Estudio del Melanoma. Bizkaia Aretioa, May 24-25. Bilbao, 2019

Talks

Machine Learning Applications to Melanoma Prognosis

Published August 31, 2019

Since creation date of Sept 2012, we got last year the recognition of CRUCES ESIko ESKERTZE 2018 for being a Group Consolidated of Excellence, according to indications of the National Institute of Health. This year 2019, we got a second recognition CRUCES ESIko ESKERTZE 2019, for being a Group with responsible researcher younger than 45 years old. Among the 58 different groups within Biocruces-Bizkaia Health Research Institute, our group of […]

Latest News

CRUCES ESIko ESKERTZE 2019

Published July 27, 2019

Cristina Sanchez-Puelles, Maria Calleja-Felipe, Alberto Ouro, Ghassen Bougamra, Ana Arroyo, Ibai Diez, Asier Erramuzpe, Jesus Cortes, Jose Martinez-Hernandez, Rafael Lujn, Marta Navarrete, Cesar Venero, Andrew Chan, Miguel Morales, Jose A. Esteban and Shira Knafo. PTEN activity defines an axis for plasticity at cortico-amygdala synapses and determines social behavior. Cerebral Cortex 30:505-524, 2019 [pdf] Abstract Phosphatase and tensin homolog on chromosome 10 (PTEN) is a tumor suppressor and autism-associated gene that […]

JCR Articles Publications

PTEN activity defines an axis for plasticity at cortico-amygdala synapses and determines social …

Published July 27, 2019

Ane Murueta-Goyena , Roco del Pino, Paula Reyero , Marta Galds, Begoa Arana, Olaia Lucas Jimenez, Marian Acera, Beatriz Tijero, Naroa Ibarretxe-Bilbao, Natalia Ojeda, Javier Pea, Jesus Cortes, Juan Carlos Gomez-Esteban, Iñigo Gabilondo. Parafoveal thinning of inner retina is associated with visual dysfunction in Lewy body diseases.  Movement disorders 34:1315-1324, 2019 [pdf] Abstract Background: Retinal optical coherence tomography findings in Lewy body diseases and their implications for visual outcomes remain controversial. […]

JCR Articles Publications

Parafoveal thinning of inner retina is associated with visual dysfunction in Lewy body …

Published July 27, 2019

2019, Brain biomarkers in neurological disorders. Los Libertadores University. Bogota, Colombia. July, 2019

Talks

Brain biomarkers in neurological disorders

Published July 27, 2019

Together with other NeuroLagun colleagues, we have organised the first session of a divulgation seminar composed by several short-talks about ageing. Four different talks, Neurogenesis (Juan Manuel Encinas), Imaging (Jesus M Cortes), Cognition (Laiene Olabarrieta) and Physical Activity as protected therapy (Gontzal Grandes). The seminar was March 26 2019, at 6.00pm Gernika-Lumoko Kultur Etxean

Latest News

I Jornadas sobre envejecimiento en Gernika

Published May 19, 2019

Together with other NeuroLagun colleagues, we have organised the first session of a divulgation seminar composed by several short-talks about ageing. Four different talks, Neurogenesis (Juan Manuel Encinas), Imaging (Jesus M Cortes), Cognition (Laiene Olabarrieta) and Physical Activity as protected therapy (Gontzal Grandes). The seminar was Thursday May 16 2019, at 6.00pm in Goñi Portal.

Latest News

I Jornadas sobre envejecimiento en Plentzia

Published May 19, 2019

2019, Brain Networks as Biomarkers in neurodegenerative diseases: Fundaments and Examples. II Jornadas de Neurologa. La Guardia, Spain. Sponsored by Alter Medica

Talks

Brain Networks as Biomarkers in Neurodegenerative Diseases

Published May 19, 2019

I was the Local Chair of the Annual Meeting of the COSTNET Action. More information at https://costnetbilbao.wordpress.com/ 110 researchers on network science attended from 24 different countries. A success event that is summarized in the following video The book of abstracts can be downloaded here This has been possible thanks to a wonderful of team of local colleagues and friends, mainly, Diego Rivera (Public University of Navarre), Borja Camino Pontes […]

Latest News

COSTNET BILBAO 2019

Published May 19, 2019

In collaboration with Luca Gerardo – Giorda (BCAM, Bilbao) and Sebastiano Stramaglia (Univ of Bari), we are organized the 2019 Quantitative Biomedicine Workshop. The poster conference [pdf] The book of abstracts [pdf]

Latest News

5th Quantitative Biomedicine Workshop (2019)

Published May 19, 2019

2019, Introduction to functional connectivity to study the pathological brain. MSc Neuroscience. University of the Basque Country, Spain

Talks

Introduction to functional connectivity to study the pathological brain

Published March 5, 2019

2019, Introdution to Computational Neuroimaging. MSc in Neuroscience. University of the Basque Country, Spain

Talks

Introdution to Computational Neuroimaging

Published March 5, 2019

Jesus M. Cortes, Paolo Bonifazi, Iñaki Escudero, Beatriz Mateos, Miguel Angel Muñoz, Sebastiano Stramaglia, Jesus M. Cortes, Borja Camino-Pontes, Antonio Jimenez-Marin, Javier Rasero, Asier Erramuzpe, Stephan Swinnen, Iñigo Gabilondo, Matthieu P. Boisgontier, Lisa Pauwels, Laiene Olabarrieta-Landa, Manuel Fernandez Martinez, Juan Carlos Arango Lasprilla, David Drijkoningen, Daniele Marinazzo, Jolien Gooijers, Ibai Diez. Brain Hierarchical Atlas: Multi-Scale versus Optimal Strategies in the Pathological Brain. OHBM 2019 – Organization for Human Brain Mapping […]

Abstracts Publications

Brain Hierarchical Atlas: Multi-Scale versus Optimal Strategies in the Pathological Brain

Published March 5, 2019

[spanish]

Jesus Cortes, Data Scientist:

  • More than 20 years experience - In research, working in data science, including modeling, analyses, and image processing, see my ORCID profile at https://orcid.org/0000-0002-9059-8194
  • High interdisciplinary experience - Combining physics, neuroscience, neuroimaging, data science, engineering, and medicine.
  • Getting funding - In competitive calls and working with the industry, achieving funding for more than 9,13 Millions Euros.
  • Science communication - Giving more than 112 talks at the international level, and publishing 120 articles indexed in Journal Citation Reports, 93 of them in the first quartile.
  • Training of qualified professionals - Supervising more than 30 students, including Bachelor, Master, and Thesis.
  • Research projects evaluation - Regularly for different funding agencies such as Spanish National Science and Health Ministry, and also at international programs, such as the Marie Sklodowska-Curie Actions, the Israel Science Foundation, the Research Foundation Flanders (FWO), the EPSRC in the UK, and the BBSRC in the UK.

Contact - If you are interested in knowing details or possibilities of collaboration:
Jesus Cortes, Ph.D.:
jesus.m.cortes@gmail.com
Computational Neuroimaging Lab
BioBizkaia Health Research Institute
Hospital Universitario Cruces
Plaza de Cruces, s/n E-48903. Barakaldo, Spain
Tel +34 94 600 6000 (ext. 5199)


 

Jesus Cortes, Científico de Datos:

  • Más de 20 años de experiencia - En investigación, trabajando con datos, en modelado, análisis e imágenes. Consulte mi perfil profesional ORCID en https://orcid.org/0000-0002-9059-8194
  • Altamente interdisciplinar - Combinando física, neurociencias, neuroimagen, ciencia de datos, ingeniería y medicina.
  • Consiguiendo financiación - En convocatorias competitivas y trabajando con la industria, habiendo conseguido más de 9,13 Millones de Euros.
  • Difusión internacional - Impartiendo más de 112 charlas a nivel internacional y publicando más 120 artículos indexados en el Journal Citation Reports, 93 de ellos en primer cuartil.
  • Formación de personal cualificado - Supervisando a más de 30 estudiantes, incluyendo Licenciatura, Maestría y Tesis.
  • Evaluación de proyectos - Lo hago de forma habitual en el Plan Nacional de Ciencia y Salud Español, y en programas internacionales, incluidas las acciones Marie Sklodowska-Curie, la Israel Science Foundation, la Research Foundation Flanders (FWO), EPSRC en Reino Unido y BBSRC en Reino Unido.
  • Contacta - Si estás interesado en conocer detalles o posibilidades de colaboración:

Jesus Cortes, Ph.D.:
jesus.m.cortes@gmail.com
Computational Neuroimaging Lab
BioBizkaia Health Research Institute
Hospital Universitario Cruces
Plaza de Cruces, s/n E-48903. Barakaldo, Spain
Tel +34 94 600 6000 (ext. 5199)

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